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Can paragraph be used for indel from 2 bp to 30 bp? #62

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349539427 opened this issue Apr 9, 2021 · 1 comment
Open

Can paragraph be used for indel from 2 bp to 30 bp? #62

349539427 opened this issue Apr 9, 2021 · 1 comment

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@349539427
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Can paragraph be used for indel from 2 bp to 30 bp?
@349539427 349539427 reopened this Apr 15, 2021
@traxexx
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traxexx commented Apr 15, 2021

Yes. The graph model should work for any length of variants. We tested it out before and it works fine for most indels.
But some optimizations might not work for small indels, which means the performance could be lower than good SVs.
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