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341 Open 181 Closed
341 Open 181 Closed
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Issues list

Trim Read 1 and Read 2 independently without detecting overlap
#487 opened May 12, 2023 by MaWeffm
[mem_sam_pe] paired reads have different names:
#483 opened Apr 28, 2023 by YeGuoZJU
Dovetail (adapter) removal not working correctly
#481 opened Apr 26, 2023 by nchernia
1
Adapter Readthrough Scenario
#480 opened Apr 20, 2023 by NicMAlexandre
Windows use
#479 opened Apr 19, 2023 by Jrosen-code
1
[FEATURE REQUEST]
#478 opened Apr 14, 2023 by jpuritz
global trimming trims too much when combined with quality pruning for SE data
#474 opened Mar 21, 2023 by eaton-lab
1
Unexpected filenames
#473 opened Mar 19, 2023 by vappiah
merge PE reads do not write fastq output in a standard way, which would cause problem in reads validation.
#472 opened Mar 18, 2023 by y9c
Removal of degenerated primers in --adaper_fasta file
#470 opened Mar 16, 2023 by BIOMOL-ANFACO
1
Order of operations - documentation
#468 opened Mar 9, 2023 by roni-fultheim
2
Workflow
#467 opened Mar 7, 2023 by lavdn
fastp会把18s的tRNA序列过滤掉吗
#466 opened Mar 3, 2023 by bigben446
using --dedup ro remove duplicated reads
#465 opened Mar 2, 2023 by yeroslaviz
fastp trim polyG is not working when the data is large
#464 opened Feb 28, 2023 by MinBio
2
Can't run or compile on Apple M1 Pro
#463 opened Feb 21, 2023 by ateixeira-specifica
1
fastp is slow
#460 opened Feb 8, 2023 by fo40225
2
Maintenance status?
#459 opened Feb 6, 2023 by mbhall88
2
PhiX contamination
#458 opened Feb 6, 2023 by lavdn
deduplication with UMI
#457 opened Feb 1, 2023 by yupingz
3
Fastp quality scores plot shows naive means of phred scores not actual means
#456 opened Jan 11, 2023 by rhpvorderman
v0.23.2 hanging/deadlocked using Mac Ventura and Montery
#455 opened Jan 10, 2023 by MarilynMil3s
2
Fastp failing to detect adapters automatically
#454 opened Jan 8, 2023 by Rohit-Satyam
1
ERROR: trim_front1 (--trim_front1) should be 0 ~ 30, suggest 0 ~ 4
#453 opened Jan 6, 2023 by realzhang
Can set -j or -h function to be disabled?
#452 opened Jan 4, 2023 by yangjw1996
2
ProTip! Follow long discussions with comments:>50.