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Bioinformatics

Bioinformatics is an interdisciplinary field that intersects with biology, computer science, mathematics and statistics. It concerns itself with the development and use of methods and software tools for collecting and analyzing biological data.

Here are 442 public repositories matching this topic...

hspitia / GenomAMf

Software appplication for multifractal analysis on complete genomes (DNA and protein) using the sand-box method

c-plus-plus qt bioinformatics multifractal-analysis

Updated Mar 5, 2010
C++

fbristow / denovo-qassembler

A de novo assembler for viral quasispecies using de Bruijn graphs and Markov chains

Updated Jun 5, 2014
C++

mttmartin / splice_detection

Naive tool meant to detect novel splicing in RNA-Seq data

bioinformatics rna-seq-analysis

Updated Apr 17, 2015
C++

pfgherardini / superpose3D

Superpose3D is a software for local comparison of protein structures that allows for user-defined structure representations

bioinformatics structural-biology evolution protein-data-bank protein-structure comparison

Updated May 6, 2015
C++

slowkow / xlmhg

📉 Non-parametric rank enrichment test for binary data.

bioinformatics gene-sets enrichment r rcpp

Updated Apr 25, 2016
C++

pentalpha / sequencer

Parallel algorithm (using OpenMP) for sequencing segments of text in order to return the full text.

c bioinformatics algorithm hackathon openmp highly-parallelized-algorithm sequencing-segments

Updated May 25, 2016
C++

t-neumann / sff-adaptersplitter

Demultiplex 454 Genome Sequencer reads from a SFF file

bioinformatics sequencing barcode computational-biology sff iontorrent de-multiplexing

Updated Aug 1, 2016
C++

uHappyLogic / isbh

Algorithm for DNA sequence assembling from isbh oligos

bioinformatics algorithm graph

Updated Oct 12, 2016
C++

crclark / optnetaligncpp

Approximate subgraph isomorphisms for biological networks

Updated Oct 15, 2016
C++

dogabaris / bioinformatics-global-alignment

Needleman-Wunsch

bioinformatics algorithms

Updated Nov 27, 2016
C++

dogabaris / bioinformatics-msa-star-algorithm

bioinformatics algorithms msa

Updated Dec 2, 2016
C++

kubawajs / AdjointGraph-Converter

Combinatorial algorithms in bioinformatics - Adjoint Graph

bioinformatics graph graph-algorithms adjoint adjoint-graph

Updated Dec 12, 2016
C++

YannDubs / modellingBacterias

Useless project that tries to model the life of different bacterias in a petri dish: for learning purpose

bioinformatics simulation modeling bacteria

Updated Jan 4, 2017
C++

labsquare / CuteVCF

simple viewer for variant call format using htslib

gui bioinformatics genomics vcf qt5 variants

Updated Jan 17, 2017
C++

fpopic / bioinf

(Class) Student assignment project (Bioinformatics)

bioinformatics genome debruijn

Updated Jan 27, 2017
C++

marekrydlewski / dna-izohybrid

Algorithm for computing dna from isothermal hybridization [Bioinformatics] [studies]

bioinformatics algorithms computing-dna studies

Updated Jan 28, 2017
C++

mschilli87 / microSNPscore

mirSVR-based tool to predict the effects of SNPs on miRNA:target interactions [migrated to gitlab]

science bioinformatics genomics scoring github-evacuee

Updated Jan 28, 2017
C++

labsquare / QVcf

a Variant VCF parser for Qt/C++

bioinformatics genomics vcf variant

Updated Feb 18, 2017
C++

kubawajs / Mapper

Combinatorial algorithms in bioinformatics - DNA/RNA mapping

bioinformatics combinatorial-algorithms

Updated Feb 27, 2017
C++

UnkindPartition / bamcc

bamcc — split SAM/BAM files into connected components

bioinformatics rna-seq biology dna alignment rna

Updated Apr 1, 2017
C++

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Related Topics

genomics sequencing