(Q22162507)

PubMed

PubMed publication ID

7 February 2023

Romain A. Studer

Romain A

Studer

1 reference

PubMed

PubMed publication ID

19368988

Consequences of genome duplication

7 February 2023

language of work or name

English

0 references

publication date

May 2009

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210-216

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cites work

1 reference

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Does lack of recombination enhance asymmetric evolution among duplicate genes? Insights from the Drosophila melanogaster genome.

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Protein function prediction--the power of multiplicity

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Reading the entrails of chickens: molecular timescales of evolution and the illusion of precision

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Do disparate mechanisms of duplication add similar genes to the genome?

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Quantification of insect genome divergence

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The genomic rate of adaptive evolution

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Modeling amino acid substitution patterns in orthologous and paralogous genes.

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Orthology, paralogy and proposed classification for paralog subtypes

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7 January 2021

Episodic adaptive evolution of primate lysozymes

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Natural history and evolutionary principles of gene duplication in fungi

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Evolution of genes and genomes on the Drosophila phylogeny

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Duplicate genes increase gene expression diversity within and between species.

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Approaches to comparative sequence analysis: towards a functional view of vertebrate genomes

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7 January 2021

Turning a hobby into a job: how duplicated genes find new functions

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7 January 2021

RNA-based gene duplication: mechanistic and evolutionary insights

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The quest for natural selection in the age of comparative genomics

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Emerging principles of regulatory evolution

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Life-history traits drive the evolutionary rates of mammalian coding and noncoding genomic elements

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The evolutionary dynamics of the Saccharomyces cerevisiae protein interaction network after duplication

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Preferential subfunctionalization of slow-evolving genes after allopolyploidization in Xenopus laevis

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Null mutations in human and mouse orthologs frequently result in different phenotypes

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Heterotachy and functional shift in protein evolution

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BADASP: predicting functional specificity in protein families using ancestral sequences.

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Positive selection drives a correlation between non-synonymous/synonymous divergence and functional divergence

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Significantly different patterns of amino acid replacement after gene duplication as compared to after speciation.

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Functional divergence prediction from evolutionary analysis: a case study of vertebrate hemoglobin

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Evolutionary conservation of expression profiles between human and mouse orthologous genes.

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7 January 2021

Gene loss and evolutionary rates following whole-genome duplication in teleost fishes

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7 January 2021

Evaluation of Whether Accelerated Protein Evolution in Chordates Has Occurred before, after, or Simultaneously with Gene Duplication

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7 January 2021

Not Born Equal: Increased Rate Asymmetry in Relocated and Retrotransposed Rodent Gene Duplicates

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7 January 2021

Divergence in Expression between Duplicated Genes in Arabidopsis

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Evolutionary switch and genetic convergence on rbcL following the evolution of C4 photosynthesis

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7 January 2021

Structural and evolutionary innovation of the heterodimerization interface between USP and the ecdysone receptor ECR in insects.

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7 January 2021

InParanoid 6: eukaryotic ortholog clusters with inparalogs

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7 January 2021

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7 January 2021

Statistical methods for testing functional divergence after gene duplication

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7 January 2021

Pervasive positive selection on duplicated and nonduplicated vertebrate protein coding genes

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7 January 2021

cis-Regulatory and protein evolution in orthologous and duplicate genes

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7 January 2021

Divergence of spatial gene expression profiles following species-specific gene duplications in human and mouse

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7 January 2021

A burst of protein sequence evolution and a prolonged period of asymmetric evolution follow gene duplication in yeast

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7 January 2021

Hitchhiking effects of recurrent beneficial amino acid substitutions in the Drosophila melanogaster genome

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7 January 2021

Functional divergence of duplicated genes formed by polyploidy during Arabidopsis evolution

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7 January 2021

Resurrecting the role of transcription factor change in developmental evolution.

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7 January 2021

Evolution of hormone-receptor complexity by molecular exploitation

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7 January 2021

Duplication and divergence: the evolution of new genes and old ideas

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7 January 2021

Orthologs, paralogs, and evolutionary genomics

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7 January 2021

Evolution of dim-light and color vision pigments

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7 January 2021

Prediction of enzyme function based on 3D templates of evolutionarily important amino acids.

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7 January 2021

Duplicated genes evolve slower than singletons despite the initial rate increase

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7 January 2021

Tracking the connection between evolutionary and functional shifts using the fungal lipase/feruloyl esterase A family

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7 January 2021

Inventing an arsenal: adaptive evolution and neofunctionalization of snake venom phospholipase A2 genes

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7 January 2021

Comparative analysis indicates regulatory neofunctionalization of yeast duplicates

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7 January 2021

Comparative genomics using Fugu reveals insights into regulatory subfunctionalization

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7 January 2021

Preferential duplication of conserved proteins in eukaryotic genomes

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7 January 2021

Evolutionary modeling of rate shifts reveals specificity determinants in HIV-1 subtypes

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https://api.crossref.org/works/10.1016%2FJ.TIG.2009.03.004

7 January 2021

Phylogenetic and functional assessment of orthologs inference projects and methods

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https://api.crossref.org/works/10.1016%2FJ.TIG.2009.03.004

7 January 2021

Patterns of positive selection in six Mammalian genomes

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https://api.crossref.org/works/10.1016%2FJ.TIG.2009.03.004

7 January 2021

Evolution of a new function by degenerative mutation in cephalochordate steroid receptors

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7 January 2021

Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution

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https://api.crossref.org/works/10.1016%2FJ.TIG.2009.03.004

7 January 2021