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@Teichlab

Teichmann Group

Sarah Teichmann's group at University of Cambridge: Cambridge Stem Cell Institute & Department of Medicine

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  1. scg_lib_structs scg_lib_structs Public

    Collections of library structure and sequence of popular single cell genomic methods

    HTML 418 87

  2. cellphonedb cellphonedb Public archive

    Python 341 105

  3. bbknn bbknn Public

    Batch balanced KNN

    Python 143 23

  4. MultiMAP MultiMAP Public

    MultiMAP for integration of single cell multi-omics

    Python 52 11

  5. embl-single-cell-course-2016 embl-single-cell-course-2016 Public

    Material for lecture at the EMBL Single Cell Course 2016

    Jupyter Notebook 47 16

Repositories

Showing 10 of 65 repositories
  • limbcellatlas Public

    This repository contains codes used for the human fetal limb cell atlas.

    Teichlab/limbcellatlas’s past year of commit activity
    Jupyter Notebook 12 2 0 0 Updated Sep 17, 2024
  • bin2cell Public

    Join subcellular Visium HD bins into cells

    Teichlab/bin2cell’s past year of commit activity
    Jupyter Notebook 38 MIT 1 3 0 Updated Sep 12, 2024
  • gene2probe Public

    Pipeline for designing custom probes against human genes

    Teichlab/gene2probe’s past year of commit activity
    Jupyter Notebook 11 MIT 3 1 1 Updated Sep 12, 2024
  • scg_lib_structs Public

    Collections of library structure and sequence of popular single cell genomic methods

    Teichlab/scg_lib_structs’s past year of commit activity
    HTML 418 87 2 0 Updated Sep 11, 2024
  • celltypist_wiki Public

    Materials and scripts for building cell type encyclopedia table

    Teichlab/celltypist_wiki’s past year of commit activity
    Python 14 3 0 0 Updated Sep 5, 2024
  • vascular_atlas Public

    Repo with analysis code for the vascular atlas paper

    Teichlab/vascular_atlas’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Sep 5, 2024
  • bracer Public

    BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data

    Teichlab/bracer’s past year of commit activity
    Python 40 22 17 (1 issue needs help) 2 Updated Sep 4, 2024
  • skeletal_dev_atlas Public
    Teichlab/skeletal_dev_atlas’s past year of commit activity
    Jupyter Notebook 0 BSD-2-Clause 0 0 0 Updated Aug 28, 2024
  • cell2tcr Public

    Inference of TCR motifs

    Teichlab/cell2tcr’s past year of commit activity
    Jupyter Notebook 25 3 1 0 Updated Aug 19, 2024
  • ALI_COVID19 Public

    Repo with analysis code for the ALI_COVID19 paper

    Teichlab/ALI_COVID19’s past year of commit activity
    Jupyter Notebook 4 1 1 0 Updated Aug 2, 2024
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