Notebook:

RShiny:

To build locally the notebooks and shiny apps locally:

• Install Docker if required
• Create a virtual environment and install repo2docker from PyPI.
• Clone this repository
• Run repo2docker.
• Depending on the permissions, you might have to run the commands as an administrator.

pip install jupyter-repo2docker
git clone https://github.com/IDR/idr0094-ellinger-sarscov2.git
cd idr0094-ellinger-sarscov2
repo2docker .

The code in this repository is licensed under BSD 2-Clause.