Phasing and genotype Imputation comparison. Have been evaluated: BEAGLE 5.4, EAGLE 2.4.1, SHAPEIT 4, MINIMAC 4, IMPUTE 5, using accuracy metrics like: IQS(Imputation Quality score), r2 (Pearson correlation), Concordance.

An R package to estimate the quality of imputation of genotypes.

Stefan's imputation accuracy package

power calculator for Genetic Risk Scores (GRS)

Asses the validity of imputation of your low-coverage samples