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Issues list

High amount of clashes in multimer models
#72 opened Nov 11, 2021 by dennissv
2
Databases used in the mmseq2 search, local version
#20 opened Aug 9, 2021 by guilhemfaure
8
tricking alphafold2 docker to use the same reference sequences as mmseq2
#21 opened Aug 11, 2021 by avilella
1
Out of memory
#32 opened Aug 27, 2021 by 893932098
2
multiple conformations?
#39 opened Sep 7, 2021 by blakely3dnm
How to predict the structure of cyclic peptides?
#40 opened Sep 8, 2021 by JustinDoIt
1
cublas status execution failed error
#43 opened Sep 16, 2021 by xlinme
1
Wait for an upload box to appear at the end of the "Input Protein ..." box. (not seeing it)
#46 opened Sep 21, 2021 by Old-Green-Man
2
Amber works in AlphaFold2_mmseqs2 but not in AlphaFold2_batch
#47 opened Sep 21, 2021 by konstin
2
MMseqs returns no hits.
#50 opened Sep 24, 2021 by matthewnicotra
How to dock peptide to protein with ColabFold
#64 opened Oct 25, 2021 by gundalav
5
[RuntimeError: Resource exhausted] Upper-limit for protein length with Colab Pro?
#67 opened Nov 1, 2021 by sdtruong
1
Is there a way to find the max GPU memory watermark? How to run locally with minimal setup
#17 opened Aug 5, 2021 by avilella
7
mmseq database prep
#70 opened Nov 8, 2021 by listofdina
6
Using AF-Multimer with custom MSA
#76 opened Nov 13, 2021 by jessica-andreani
8
AlphaFold2_mmseqs2 crashed upon processing protein sequence with repeat
#77 opened Nov 13, 2021 by gundalav
1
IndexError
#79 opened Nov 14, 2021 by sunimei3
2
Problems with compressing results in AlphaFold2_batch and when checking that a job is completed
#84 opened Nov 16, 2021 by EnzoAndree
2
on running colabfold locally
#85 opened Nov 16, 2021 by xvazquezc
10
"mem_align could not allocate memory." in colabfold_search.sh
#87 opened Nov 17, 2021 by jasperzuallaert
2
Download only the required weights in batch notebook
#95 opened Nov 20, 2021 by konstin
Could not load dynamic library 'libcusolver.so.11'
#98 opened Nov 23, 2021 by ihbxiongjie
2
pdbfixer
#107 opened Nov 28, 2021 by brianlross
2
setup_databases fails with "Error: indexdb died" when running mmseqs createindex step
#116 opened Dec 5, 2021 by ulupo
4
MSA on local machine?
#650 opened Sep 9, 2024 by GXcells
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